Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM1P09493 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.71■□□□□ 0.11
TPM1P09493 CHCHD2P3-201ENST00000603038 451 ntBASIC15.71■□□□□ 0.11
TPM1P09493 AC008825.2-201ENST00000603374 718 ntBASIC15.71■□□□□ 0.11
TPM1P09493 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.71■□□□□ 0.11
TPM1P09493 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPM1P09493 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM1P09493 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM1P09493 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM1P09493 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM1P09493 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM1P09493 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM1P09493 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPM1P09493 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM1P09493 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.71■□□□□ 0.11
TPM1P09493 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TPM1P09493 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TPM1P09493 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.71■□□□□ 0.1
TPM1P09493 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TPM1P09493 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TPM1P09493 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TPM1P09493 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TPM1P09493 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TPM1P09493 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM1P09493 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM1P09493 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM1P09493 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 CICP12-201ENST00000455801 843 ntBASIC15.7■□□□□ 0.1
TPM1P09493 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.7■□□□□ 0.1
TPM1P09493 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.7■□□□□ 0.1
TPM1P09493 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.7■□□□□ 0.1
TPM1P09493 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 WFDC1-204ENST00000613603 549 ntBASIC15.7■□□□□ 0.1
TPM1P09493 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.7■□□□□ 0.1
TPM1P09493 CR392039.2-201ENST00000623182 509 ntBASIC15.7■□□□□ 0.1
TPM1P09493 AL033527.5-201ENST00000641382 801 ntBASIC15.7■□□□□ 0.1
TPM1P09493 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TPM1P09493 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TPM1P09493 AGAP12P-201ENST00000585227 2359 ntBASIC15.7■□□□□ 0.1
TPM1P09493 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM1P09493 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 AL138709.1-201ENST00000614840 1693 ntBASIC15.7■□□□□ 0.1
TPM1P09493 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TPM1P09493 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM1P09493 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPM1P09493 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC15.69■□□□□ 0.1
TPM1P09493 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TPM1P09493 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TPM1P09493 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM1P09493 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 TNRC18P1-201ENST00000502875 3650 ntBASIC15.69■□□□□ 0.1
TPM1P09493 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TPM1P09493 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.69■□□□□ 0.1
TPM1P09493 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TPM1P09493 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TPM1P09493 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 CD8B2-202ENST00000417670 633 ntBASIC15.69■□□□□ 0.1
TPM1P09493 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM1P09493 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TPM1P09493 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM1P09493 AC005498.2-205ENST00000593218 784 ntBASIC15.69■□□□□ 0.1
TPM1P09493 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.69■□□□□ 0.1
TPM1P09493 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM1P09493 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms