Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 SALL4P6-201ENST00000429385 1691 ntBASIC13.09□□□□□ -0.31
THBS1P07996 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.09□□□□□ -0.31
THBS1P07996 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 AL603841.1-201ENST00000430516 664 ntBASIC13.09□□□□□ -0.31
THBS1P07996 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 AC006033.1-201ENST00000440505 426 ntBASIC13.09□□□□□ -0.31
THBS1P07996 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.09□□□□□ -0.31
THBS1P07996 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.09□□□□□ -0.31
THBS1P07996 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.09□□□□□ -0.31
THBS1P07996 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.09□□□□□ -0.31
THBS1P07996 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 MIR3615-201ENST00000581999 87 ntBASIC13.09□□□□□ -0.31
THBS1P07996 RN7SL163P-201ENST00000583100 276 ntBASIC13.09□□□□□ -0.31
THBS1P07996 AC084346.2-201ENST00000607097 949 ntBASIC13.09□□□□□ -0.31
THBS1P07996 AL136370.1-201ENST00000608166 691 ntBASIC13.09□□□□□ -0.31
THBS1P07996 AL096828.3-201ENST00000615354 462 ntBASIC13.09□□□□□ -0.31
THBS1P07996 AC022748.3-201ENST00000621828 275 ntBASIC13.09□□□□□ -0.31
THBS1P07996 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 AC092053.3-201ENST00000641308 4975 ntBASIC13.09□□□□□ -0.31
THBS1P07996 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.09□□□□□ -0.31
THBS1P07996 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.09□□□□□ -0.31
THBS1P07996 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
THBS1P07996 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
THBS1P07996 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
THBS1P07996 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.08□□□□□ -0.31
THBS1P07996 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
THBS1P07996 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
THBS1P07996 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.08□□□□□ -0.32
THBS1P07996 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
THBS1P07996 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 AL139158.3-201ENST00000641212 1562 ntBASIC13.08□□□□□ -0.32
THBS1P07996 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.08□□□□□ -0.32
THBS1P07996 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.08□□□□□ -0.32
THBS1P07996 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
THBS1P07996 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
THBS1P07996 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.08□□□□□ -0.32
THBS1P07996 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.08□□□□□ -0.32
THBS1P07996 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.08□□□□□ -0.32
THBS1P07996 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.08□□□□□ -0.32
THBS1P07996 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.08□□□□□ -0.32
THBS1P07996 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms