Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
POLR3DP05423 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 AC006987.1-201ENST00000413610 527 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.94■□□□□ 0.3
POLR3DP05423 RPL18AP8-201ENST00000486071 528 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 AP002803.1-201ENST00000528836 498 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 IQSEC3P1-201ENST00000538799 536 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.94■□□□□ 0.3
POLR3DP05423 MIR5572-201ENST00000583188 137 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.94■□□□□ 0.3
POLR3DP05423 AC018635.2-201ENST00000608625 364 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 AC087392.5-201ENST00000612517 489 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 AL591122.2-201ENST00000624125 1853 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 AC020910.6-201ENST00000623084 1459 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 AC104581.4-201ENST00000623126 3052 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
POLR3DP05423 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
POLR3DP05423 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR3DP05423 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR3DP05423 AC008267.1-201ENST00000474858 1069 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 RN7SL81P-201ENST00000493781 261 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.93■□□□□ 0.3
POLR3DP05423 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR3DP05423 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.93■□□□□ 0.3
POLR3DP05423 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.93■□□□□ 0.3
POLR3DP05423 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.93■□□□□ 0.3
POLR3DP05423 AC007881.3-201ENST00000608897 607 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 AL021707.6-201ENST00000609212 491 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
POLR3DP05423 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 TEKT4P2-202ENST00000559466 1312 ntBASIC16.93■□□□□ 0.3
POLR3DP05423 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR3DP05423 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR3DP05423 AC067931.2-201ENST00000623655 2003 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
POLR3DP05423 AC011474.4-201ENST00000623523 2076 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
POLR3DP05423 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
POLR3DP05423 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR3DP05423 AC130709.1-201ENST00000484779 1212 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 MRPL22P1-201ENST00000505398 616 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
POLR3DP05423 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.92■□□□□ 0.3
POLR3DP05423 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms