Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
CD3DP04234 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CD3DP04234 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD3DP04234 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD3DP04234 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 AC022144.1-201ENST00000602255 1580 ntBASIC12.05□□□□□ -0.48
CD3DP04234 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 SPDYE19P-201ENST00000338590 713 ntBASIC12.05□□□□□ -0.48
CD3DP04234 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.05□□□□□ -0.48
CD3DP04234 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
CD3DP04234 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.05□□□□□ -0.48
CD3DP04234 AC011495.1-201ENST00000498085 584 ntBASIC12.05□□□□□ -0.48
CD3DP04234 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.05□□□□□ -0.48
CD3DP04234 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.05□□□□□ -0.48
CD3DP04234 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.05□□□□□ -0.48
CD3DP04234 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 AC004449.1-201ENST00000564240 433 ntBASIC12.05□□□□□ -0.48
CD3DP04234 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.05□□□□□ -0.48
CD3DP04234 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 AC009955.4-201ENST00000597192 544 ntBASIC12.05□□□□□ -0.48
CD3DP04234 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.05□□□□□ -0.48
CD3DP04234 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.05□□□□□ -0.48
CD3DP04234 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.05□□□□□ -0.48
CD3DP04234 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD3DP04234 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.04□□□□□ -0.48
CD3DP04234 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.04□□□□□ -0.48
CD3DP04234 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.04□□□□□ -0.48
CD3DP04234 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.04□□□□□ -0.48
CD3DP04234 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD3DP04234 AL805961.2-201ENST00000642139 4817 ntBASIC12.04□□□□□ -0.48
CD3DP04234 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
CD3DP04234 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD3DP04234 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.04□□□□□ -0.48
CD3DP04234 MIR943-201ENST00000401286 94 ntBASIC12.04□□□□□ -0.48
CD3DP04234 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.04□□□□□ -0.48
CD3DP04234 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.04□□□□□ -0.48
CD3DP04234 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.04□□□□□ -0.48
CD3DP04234 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.04□□□□□ -0.48
CD3DP04234 AP006288.1-201ENST00000446065 395 ntBASIC12.04□□□□□ -0.48
CD3DP04234 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.04□□□□□ -0.48
CD3DP04234 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.04□□□□□ -0.48
CD3DP04234 AC067863.1-201ENST00000494933 530 ntBASIC12.04□□□□□ -0.48
CD3DP04234 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.04□□□□□ -0.48
CD3DP04234 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms