Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 FRMPD2B-201ENST00000431305 1347 ntBASIC12.7□□□□□ -0.38
CNOT4O95628 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 AC092978.1-202ENST00000637590 1327 ntBASIC12.7□□□□□ -0.38
CNOT4O95628 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.7□□□□□ -0.38
CNOT4O95628 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.7□□□□□ -0.38
CNOT4O95628 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.7□□□□□ -0.38
CNOT4O95628 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.7□□□□□ -0.38
CNOT4O95628 AL133499.1-201ENST00000596207 608 ntBASIC12.7□□□□□ -0.38
CNOT4O95628 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 RN7SL832P-201ENST00000607781 1756 ntBASIC12.7□□□□□ -0.38
CNOT4O95628 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 AC005840.4-201ENST00000541242 2494 ntBASIC12.7□□□□□ -0.38
CNOT4O95628 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.7□□□□□ -0.38
CNOT4O95628 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CNOT4O95628 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CNOT4O95628 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 AC006480.2-201ENST00000609770 1337 ntBASIC12.69□□□□□ -0.38
CNOT4O95628 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
CNOT4O95628 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 ACTG1P2-201ENST00000415776 1125 ntBASIC12.69□□□□□ -0.38
CNOT4O95628 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 ACTG1P11-201ENST00000425411 1125 ntBASIC12.69□□□□□ -0.38
CNOT4O95628 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 RN7SL530P-201ENST00000485097 298 ntBASIC12.69□□□□□ -0.38
CNOT4O95628 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 AL353770.1-201ENST00000614915 403 ntBASIC12.69□□□□□ -0.38
CNOT4O95628 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.69□□□□□ -0.38
CNOT4O95628 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.69□□□□□ -0.38
CNOT4O95628 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms