Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 AC245100.3-201ENST00000441281 285 ntBASIC15.49■□□□□ 0.07
CCDC66A2RUB6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 MESTP3-201ENST00000503460 968 ntBASIC15.49■□□□□ 0.07
CCDC66A2RUB6 SERBP1P5-201ENST00000510079 1181 ntBASIC15.49■□□□□ 0.07
CCDC66A2RUB6 AC009486.1-201ENST00000569860 813 ntBASIC15.49■□□□□ 0.07
CCDC66A2RUB6 CHCHD2P3-201ENST00000603038 451 ntBASIC15.49■□□□□ 0.07
CCDC66A2RUB6 BX088702.1-201ENST00000610784 235 ntBASIC15.49■□□□□ 0.07
CCDC66A2RUB6 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 CIC-204ENST00000572681 8218 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC66A2RUB6 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 AC010536.1-201ENST00000538868 2611 ntBASIC15.48■□□□□ 0.07
CCDC66A2RUB6 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 AC093433.1-201ENST00000458048 571 ntBASIC15.48■□□□□ 0.07
CCDC66A2RUB6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 CU634019.7-201ENST00000624153 1185 ntBASIC15.48■□□□□ 0.07
CCDC66A2RUB6 FP236241.2-201ENST00000624906 1185 ntBASIC15.48■□□□□ 0.07
CCDC66A2RUB6 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 HSPA8P5-201ENST00000456928 2069 ntBASIC15.48■□□□□ 0.07
CCDC66A2RUB6 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC66A2RUB6 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 AR-208ENST00000612452 10676 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 CLUHP2-201ENST00000426660 1303 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 MKRN5P-201ENST00000445263 1467 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 AC236430.1-201ENST00000402231 743 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms