Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 GRAMD4P6-201ENST00000556999 244 ntBASIC18.88■□□□□ 0.61
PHF8Q9UPP1 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 AC020922.4-201ENST00000621389 339 ntBASIC18.88■□□□□ 0.61
PHF8Q9UPP1 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHF8Q9UPP1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AC007279.1-201ENST00000448547 837 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 RCC2P1-201ENST00000452257 1476 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 RN7SL523P-201ENST00000484401 298 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AC011431.1-201ENST00000512971 230 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AP000920.1-201ENST00000531824 344 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 MIR3908-201ENST00000579798 126 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 PRR20FP-201ENST00000603320 180 ntBASIC18.87■□□□□ 0.61
PHF8Q9UPP1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF8Q9UPP1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC126177.1-201ENST00000547829 2218 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 GUCY2EP-203ENST00000531117 1918 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AL050341.2-201ENST00000567508 1541 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC010740.1-201ENST00000417035 684 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC092910.2-201ENST00000491262 348 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC023051.2-201ENST00000541141 460 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 RN7SL480P-201ENST00000581481 294 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AC137723.2-201ENST00000623540 398 ntBASIC18.86■□□□□ 0.61
PHF8Q9UPP1 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHF8Q9UPP1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms