Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 AL161773.1-201ENST00000624845 863 ntBASIC16.49■□□□□ 0.23
SLF1Q9BQI6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLF1Q9BQI6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC098934.1-203ENST00000442868 1262 ntBASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC018638.5-201ENST00000450885 754 ntBASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AP000322.3-201ENST00000608665 388 ntBASIC16.48■□□□□ 0.23
SLF1Q9BQI6 AL021707.6-201ENST00000609212 491 ntBASIC16.48■□□□□ 0.23
SLF1Q9BQI6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLF1Q9BQI6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 RNA5SP417-201ENST00000516459 108 ntBASIC16.47■□□□□ 0.23
SLF1Q9BQI6 IGHV3-37-201ENST00000518544 340 ntBASIC16.47■□□□□ 0.23
SLF1Q9BQI6 AP003398.1-201ENST00000531124 318 ntBASIC16.47■□□□□ 0.23
SLF1Q9BQI6 OR5BD1P-201ENST00000532527 817 ntBASIC16.47■□□□□ 0.23
SLF1Q9BQI6 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 AC005041.3-201ENST00000606287 649 ntBASIC16.47■□□□□ 0.23
SLF1Q9BQI6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLF1Q9BQI6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms