Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 MIR4683-201ENST00000579659 81 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC132192.2-201ENST00000596206 1147 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 GPR182-203ENST00000622922 591 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC004923.1-202ENST00000642106 209 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 AC083964.2-201ENST00000623988 2396 ntBASIC12.96□□□□□ -0.33
USB1Q9BQ65 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
USB1Q9BQ65 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
USB1Q9BQ65 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.96□□□□□ -0.34
USB1Q9BQ65 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.96□□□□□ -0.34
USB1Q9BQ65 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 AC092117.1-201ENST00000621230 3250 ntBASIC12.96□□□□□ -0.34
USB1Q9BQ65 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
USB1Q9BQ65 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USB1Q9BQ65 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.95□□□□□ -0.34
USB1Q9BQ65 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 EIF4HP1-201ENST00000453115 687 ntBASIC12.95□□□□□ -0.34
USB1Q9BQ65 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC114982.2-201ENST00000461396 358 ntBASIC12.95□□□□□ -0.34
USB1Q9BQ65 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC022919.1-201ENST00000624979 626 ntBASIC12.95□□□□□ -0.34
USB1Q9BQ65 AL139099.5-201ENST00000635274 300 ntBASIC12.95□□□□□ -0.34
USB1Q9BQ65 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.95□□□□□ -0.34
USB1Q9BQ65 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USB1Q9BQ65 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms