Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 GRAMD4P3-201ENST00000621665 1669 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 PPP1R26P2-201ENST00000611403 3595 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 RPL13AP23-201ENST00000480739 586 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 GIMAP3P-201ENST00000495150 836 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 AC093813.1-201ENST00000605066 256 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 TUBB4AP1-201ENST00000450755 1325 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 AL358781.1-202ENST00000321081 1360 ntBASIC9.24□□□□□ -0.93
SMIM11BQ8TCY0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 SALL4P6-201ENST00000429385 1691 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AC061965.1-201ENST00000560524 1465 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AC004870.1-201ENST00000315132 882 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 RN7SKP230-201ENST00000365642 335 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 ARSEP1-201ENST00000420443 635 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 EIF3FP3-201ENST00000434851 1086 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AL591424.1-201ENST00000442569 1213 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AC022145.2-201ENST00000598203 171 ntBASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC9.23□□□□□ -0.93
SMIM11BQ8TCY0 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms