Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SHROOM2P1-201ENST00000434773 2384 ntBASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM53Q6P2H8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC063926.2-201ENST00000623766 1308 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC007969.1-201ENST00000433675 447 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC234783.1-201ENST00000441761 496 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC025279.2-201ENST00000569730 653 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AL035252.4-201ENST00000624174 288 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 AL583810.2-201ENST00000556430 3254 ntBASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TMEM53Q6P2H8 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.15□□□□□ -0.31
TMEM53Q6P2H8 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TMEM53Q6P2H8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
TMEM53Q6P2H8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms