Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AC068760.1-201ENST00000493579 1953 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 OR10N1P-201ENST00000392758 869 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 IFNWP2-201ENST00000431203 580 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AL590235.1-201ENST00000564650 861 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 MIR8071-1-201ENST00000616769 65 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 MIR8071-2-201ENST00000616772 65 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AC026336.4-201ENST00000624565 1050 ntBASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD4Q5XG99 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 CDCA4P4-201ENST00000435216 680 ntBASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AC027612.2-202ENST00000445955 1199 ntBASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 TPT1P11-201ENST00000458482 498 ntBASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 BCL2L12P1-201ENST00000508390 733 ntBASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD4Q5XG99 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 286.5 ms