Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PER3P56645 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.28□□□□□ -0.28
PER3P56645 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PER3P56645 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 AC025271.4-201ENST00000621477 1726 ntBASIC13.27□□□□□ -0.28
PER3P56645 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PER3P56645 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PER3P56645 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.27□□□□□ -0.28
PER3P56645 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.27□□□□□ -0.28
PER3P56645 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PER3P56645 AL031595.1-201ENST00000623969 4709 ntBASIC13.27□□□□□ -0.29
PER3P56645 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.27□□□□□ -0.29
PER3P56645 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.27□□□□□ -0.29
PER3P56645 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.27□□□□□ -0.29
PER3P56645 AL160314.3-201ENST00000556041 767 ntBASIC13.27□□□□□ -0.29
PER3P56645 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.27□□□□□ -0.29
PER3P56645 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.27□□□□□ -0.29
PER3P56645 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.27□□□□□ -0.29
PER3P56645 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
PER3P56645 AC008825.2-201ENST00000603374 718 ntBASIC13.27□□□□□ -0.29
PER3P56645 AC092171.5-201ENST00000608012 942 ntBASIC13.27□□□□□ -0.29
PER3P56645 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
PER3P56645 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PER3P56645 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 SALL4P5-201ENST00000419001 1760 ntBASIC13.27□□□□□ -0.29
PER3P56645 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.27□□□□□ -0.29
PER3P56645 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.27□□□□□ -0.29
PER3P56645 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.27□□□□□ -0.29
PER3P56645 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.27□□□□□ -0.29
PER3P56645 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.27□□□□□ -0.29
PER3P56645 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PER3P56645 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.26□□□□□ -0.29
PER3P56645 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.26□□□□□ -0.29
PER3P56645 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.26□□□□□ -0.29
PER3P56645 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 AP000356.3-201ENST00000382243 753 ntBASIC13.26□□□□□ -0.29
PER3P56645 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.26□□□□□ -0.29
PER3P56645 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.26□□□□□ -0.29
PER3P56645 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.26□□□□□ -0.29
PER3P56645 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.26□□□□□ -0.29
PER3P56645 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PER3P56645 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms