Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.81□□□□□ -0.04
MTHFRP42898 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.81□□□□□ -0.04
MTHFRP42898 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 AL451000.1-201ENST00000451300 1186 ntBASIC14.81□□□□□ -0.04
MTHFRP42898 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.81□□□□□ -0.04
MTHFRP42898 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.81□□□□□ -0.04
MTHFRP42898 AL160191.2-201ENST00000603975 601 ntBASIC14.81□□□□□ -0.04
MTHFRP42898 MME-218ENST00000625667 363 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.8□□□□□ -0.04
MTHFRP42898 ASS1P2-201ENST00000439895 1223 ntBASIC14.8□□□□□ -0.04
MTHFRP42898 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.8□□□□□ -0.04
MTHFRP42898 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.8□□□□□ -0.04
MTHFRP42898 SORD2P-201ENST00000558556 1069 ntBASIC14.8□□□□□ -0.04
MTHFRP42898 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 AC019109.1-201ENST00000401725 1874 ntBASIC14.8□□□□□ -0.04
MTHFRP42898 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.8□□□□□ -0.04
MTHFRP42898 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.8□□□□□ -0.04
MTHFRP42898 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MTHFRP42898 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MTHFRP42898 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.79□□□□□ -0.04
MTHFRP42898 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
MTHFRP42898 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MTHFRP42898 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 AL357373.1-201ENST00000394974 322 ntBASIC14.79□□□□□ -0.04
MTHFRP42898 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.79□□□□□ -0.04
MTHFRP42898 OR52M2P-201ENST00000414298 959 ntBASIC14.79□□□□□ -0.04
MTHFRP42898 KRT18P4-201ENST00000422599 1288 ntBASIC14.79□□□□□ -0.04
MTHFRP42898 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MTHFRP42898 AL161932.2-201ENST00000435436 679 ntBASIC14.79□□□□□ -0.04
MTHFRP42898 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms