Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.59■□□□□ 0.09
KRT9P35527 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.59■□□□□ 0.09
KRT9P35527 PCDHA6-201ENST00000378126 3267 ntBASIC15.59■□□□□ 0.09
KRT9P35527 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
KRT9P35527 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KRT9P35527 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
KRT9P35527 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
KRT9P35527 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
KRT9P35527 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
KRT9P35527 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
KRT9P35527 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
KRT9P35527 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
KRT9P35527 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.58■□□□□ 0.09
KRT9P35527 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 ANKRD19P-201ENST00000338192 862 ntBASIC15.58■□□□□ 0.08
KRT9P35527 MIR326-201ENST00000362220 95 ntBASIC15.58■□□□□ 0.08
KRT9P35527 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.58■□□□□ 0.08
KRT9P35527 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT9P35527 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.58■□□□□ 0.08
KRT9P35527 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.58■□□□□ 0.08
KRT9P35527 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.58■□□□□ 0.08
KRT9P35527 SNX29P1-201ENST00000548357 1007 ntBASIC15.58■□□□□ 0.08
KRT9P35527 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.58■□□□□ 0.08
KRT9P35527 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
KRT9P35527 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
KRT9P35527 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.58■□□□□ 0.08
KRT9P35527 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
KRT9P35527 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
KRT9P35527 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.58■□□□□ 0.08
KRT9P35527 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
KRT9P35527 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
KRT9P35527 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KRT9P35527 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.57■□□□□ 0.08
KRT9P35527 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 CSF2RBP1-201ENST00000447905 391 ntBASIC15.57■□□□□ 0.08
KRT9P35527 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.57■□□□□ 0.08
KRT9P35527 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 HILS1-202ENST00000545329 423 ntBASIC15.57■□□□□ 0.08
KRT9P35527 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AL445250.1-201ENST00000641671 2259 ntBASIC15.57■□□□□ 0.08
KRT9P35527 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 BEND3P3-201ENST00000611030 2440 ntBASIC15.57■□□□□ 0.08
KRT9P35527 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 AC125807.2-201ENST00000513358 3514 ntBASIC15.57■□□□□ 0.08
KRT9P35527 REXO1L6P-201ENST00000603433 1515 ntBASIC15.57■□□□□ 0.08
KRT9P35527 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
KRT9P35527 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AC092053.3-201ENST00000641308 4975 ntBASIC15.57■□□□□ 0.08
KRT9P35527 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
KRT9P35527 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms