Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 RN7SKP109-201ENST00000410592 316 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.24□□□□□ -0.13
HOXD12P35452 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 RN7SL277P-201ENST00000481521 288 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HOXD12P35452 AC011247.3-201ENST00000603297 438 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 AC090386.2-201ENST00000623010 1039 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.24□□□□□ -0.13
HOXD12P35452 AL451007.2-201ENST00000632004 563 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 AP002353.1-201ENST00000528257 1599 ntBASIC14.24□□□□□ -0.13
HOXD12P35452 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HOXD12P35452 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HOXD12P35452 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXD12P35452 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HOXD12P35452 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HOXD12P35452 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.24□□□□□ -0.13
HOXD12P35452 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 AL118506.1-201ENST00000601296 3082 ntBASIC14.23□□□□□ -0.13
HOXD12P35452 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.23□□□□□ -0.13
HOXD12P35452 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 RN7SL767P-201ENST00000493013 295 ntBASIC14.23□□□□□ -0.13
HOXD12P35452 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 AC007952.4-201ENST00000573866 637 ntBASIC14.23□□□□□ -0.13
HOXD12P35452 RN7SL357P-201ENST00000581065 298 ntBASIC14.23□□□□□ -0.13
HOXD12P35452 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXD12P35452 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXD12P35452 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXD12P35452 FAM90A21P-201ENST00000510875 1396 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A15P-201ENST00000514465 1395 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A6P-201ENST00000515148 1394 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A16P-201ENST00000526662 1395 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A9P-201ENST00000527940 1395 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A5P-201ENST00000528738 1395 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A14P-201ENST00000530386 1395 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 FAM90A13P-201ENST00000534703 1395 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 AC023024.2-201ENST00000623561 1993 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms