Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.02■□□□□ -0
CHRNA3P32297 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.02■□□□□ -0
CHRNA3P32297 AC010141.1-201ENST00000411585 623 ntBASIC15.02■□□□□ -0
CHRNA3P32297 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.02■□□□□ -0
CHRNA3P32297 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA3P32297 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA3P32297 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA3P32297 AC021723.1-201ENST00000486306 515 ntBASIC15.02■□□□□ -0
CHRNA3P32297 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA3P32297 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA3P32297 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA3P32297 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CHRNA3P32297 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA3P32297 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.02■□□□□ -0
CHRNA3P32297 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNA3P32297 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNA3P32297 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CHRNA3P32297 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA3P32297 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA3P32297 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
CHRNA3P32297 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA3P32297 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.02□□□□□ -0.01
CHRNA3P32297 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA3P32297 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.02□□□□□ -0.01
CHRNA3P32297 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRNA3P32297 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CHRNA3P32297 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
CHRNA3P32297 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA3P32297 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA3P32297 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRNA3P32297 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHRNA3P32297 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA3P32297 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA3P32297 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA3P32297 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.01□□□□□ -0.01
CHRNA3P32297 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA3P32297 DUX4L46-201ENST00000566845 751 ntBASIC15.01□□□□□ -0.01
CHRNA3P32297 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA3P32297 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CHRNA3P32297 AC008825.2-201ENST00000603374 718 ntBASIC15.01□□□□□ -0.01
CHRNA3P32297 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA3P32297 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA3P32297 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA3P32297 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHRNA3P32297 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRNA3P32297 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 KRT8P29-201ENST00000420409 1371 ntBASIC15□□□□□ -0.01
CHRNA3P32297 GOLGA8EP-201ENST00000530246 1959 ntBASIC15□□□□□ -0.01
CHRNA3P32297 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHRNA3P32297 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNA3P32297 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15□□□□□ -0.01
CHRNA3P32297 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms