Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 AL022313.4-201ENST00000562756 2046 ntBASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR1DQ9Y2S0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR1DQ9Y2S0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC005034.1-201ENST00000426657 489 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 YBX1P6-201ENST00000442962 1002 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC106886.1-201ENST00000568660 600 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC009884.2-201ENST00000603110 324 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AL512343.1-201ENST00000605837 169 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC104506.1-201ENST00000609247 429 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AC008687.7-202ENST00000637404 953 ntBASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR1DQ9Y2S0 AL023775.1-201ENST00000454907 1746 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 GAPDHP21-201ENST00000450301 1010 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 GPR53P-205ENST00000457298 1084 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 MIR4741-201ENST00000579822 90 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 AL162274.1-201ENST00000617191 1098 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms