Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
VRK1Q99986 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 KRT8P29-201ENST00000420409 1371 ntBASIC12.69□□□□□ -0.38
VRK1Q99986 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
VRK1Q99986 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 AC009093.2-202ENST00000620513 2079 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VRK1Q99986 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 SLC25A24P2-201ENST00000415059 510 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.68□□□□□ -0.38
VRK1Q99986 RNMTL1P1-201ENST00000454103 560 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 SERPINA13P-202ENST00000478994 924 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.68□□□□□ -0.38
VRK1Q99986 AC138696.2-201ENST00000607376 223 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 AL358472.3-201ENST00000608147 415 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 AC138649.2-201ENST00000615886 705 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 AL023803.2-201ENST00000620080 638 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 AC068587.10-201ENST00000641210 219 ntBASIC12.68□□□□□ -0.38
VRK1Q99986 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VRK1Q99986 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.68□□□□□ -0.38
VRK1Q99986 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VRK1Q99986 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
VRK1Q99986 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VRK1Q99986 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 AC005077.2-201ENST00000449786 690 ntBASIC12.67□□□□□ -0.38
VRK1Q99986 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 AC106794.1-201ENST00000506935 792 ntBASIC12.67□□□□□ -0.38
VRK1Q99986 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 AC044849.1-201ENST00000519737 1188 ntBASIC12.67□□□□□ -0.38
VRK1Q99986 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 ACTG1P17-201ENST00000558391 1119 ntBASIC12.67□□□□□ -0.38
VRK1Q99986 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.67□□□□□ -0.38
VRK1Q99986 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
VRK1Q99986 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms