Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC078819.1-201ENST00000547454 765 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC012085.1-201ENST00000548270 765 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 BX088702.1-201ENST00000610784 235 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 BAP1-211ENST00000615113 489 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AL928654.5-201ENST00000624831 2501 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC009474.1-201ENST00000455096 1565 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AC006001.1-201ENST00000325130 474 ntBASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AL391647.1-201ENST00000395664 511 ntBASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 BOLA2P3-201ENST00000404566 256 ntBASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ALG3P1-201ENST00000508806 1114 ntBASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 AC106886.1-201ENST00000568660 600 ntBASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 MARK2P9-201ENST00000430958 1727 ntBASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms