Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 NOC2LP1-201ENST00000450578 752 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 MIR4265-201ENST00000582152 99 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AC007881.3-201ENST00000608897 607 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 MIR6842-201ENST00000612539 65 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AL805961.1-201ENST00000642026 753 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 AC008620.2-201ENST00000510294 1569 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 TEKT4P2-202ENST00000559466 1312 ntBASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ARHGEF39Q8N4T4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC015909.5-201ENST00000624336 2266 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC138761.6-201ENST00000583997 1423 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC019109.1-201ENST00000401725 1874 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 PYY2-201ENST00000315776 282 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AP000356.3-201ENST00000382243 753 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC092506.1-202ENST00000401022 528 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC069218.1-201ENST00000435269 762 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 ERP29P1-201ENST00000442902 706 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SCARNA12-201ENST00000459155 270 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC138701.2-201ENST00000553634 226 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AC092171.5-201ENST00000608012 942 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AL589935.2-201ENST00000616471 1231 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 AL353726.2-201ENST00000623259 884 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms