Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.01■□□□□ 0.15
TPM4P67936 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.01■□□□□ 0.15
TPM4P67936 METTL21AP1-201ENST00000438852 635 ntBASIC16.01■□□□□ 0.15
TPM4P67936 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.01■□□□□ 0.15
TPM4P67936 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.01■□□□□ 0.15
TPM4P67936 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TPM4P67936 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM4P67936 AP001160.2-201ENST00000596071 487 ntBASIC16.01■□□□□ 0.15
TPM4P67936 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.01■□□□□ 0.15
TPM4P67936 AC027601.3-201ENST00000622907 509 ntBASIC16.01■□□□□ 0.15
TPM4P67936 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 AL355102.3-201ENST00000554299 1678 ntBASIC16.01■□□□□ 0.15
TPM4P67936 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM4P67936 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM4P67936 AP002761.4-201ENST00000565433 3361 ntBASIC16.01■□□□□ 0.15
TPM4P67936 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM4P67936 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM4P67936 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM4P67936 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TPM4P67936 TNRC18P1-201ENST00000502875 3650 ntBASIC16■□□□□ 0.15
TPM4P67936 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 KRT18P28-201ENST00000453838 1332 ntBASIC16■□□□□ 0.15
TPM4P67936 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16■□□□□ 0.15
TPM4P67936 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TPM4P67936 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16■□□□□ 0.15
TPM4P67936 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16■□□□□ 0.15
TPM4P67936 AC098850.1-201ENST00000419919 790 ntBASIC16■□□□□ 0.15
TPM4P67936 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16■□□□□ 0.15
TPM4P67936 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 INE1-201ENST00000456273 945 ntBASIC16■□□□□ 0.15
TPM4P67936 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 AC093512.1-201ENST00000617969 520 ntBASIC16■□□□□ 0.15
TPM4P67936 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC16■□□□□ 0.15
TPM4P67936 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16■□□□□ 0.15
TPM4P67936 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TPM4P67936 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
TPM4P67936 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TPM4P67936 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16■□□□□ 0.15
TPM4P67936 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TPM4P67936 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
TPM4P67936 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms