Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.5□□□□□ -0.25
CLK1P49759 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 AC006001.1-201ENST00000325130 474 ntBASIC13.49□□□□□ -0.25
CLK1P49759 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLK1P49759 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.49□□□□□ -0.25
CLK1P49759 TMEM14DP-201ENST00000422205 345 ntBASIC13.49□□□□□ -0.25
CLK1P49759 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.49□□□□□ -0.25
CLK1P49759 ALG3P1-201ENST00000508806 1114 ntBASIC13.49□□□□□ -0.25
CLK1P49759 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.49□□□□□ -0.25
CLK1P49759 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.49□□□□□ -0.25
CLK1P49759 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.49□□□□□ -0.25
CLK1P49759 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.49□□□□□ -0.25
CLK1P49759 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.49□□□□□ -0.25
CLK1P49759 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.49□□□□□ -0.25
CLK1P49759 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 AC138696.2-201ENST00000607376 223 ntBASIC13.49□□□□□ -0.25
CLK1P49759 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 AC092117.1-201ENST00000621230 3250 ntBASIC13.49□□□□□ -0.25
CLK1P49759 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CLK1P49759 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.49□□□□□ -0.25
CLK1P49759 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLK1P49759 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 AP000593.2-201ENST00000542775 1433 ntBASIC13.48□□□□□ -0.25
CLK1P49759 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CLK1P49759 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLK1P49759 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 AL445209.1-201ENST00000607269 3491 ntBASIC13.48□□□□□ -0.25
CLK1P49759 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.48□□□□□ -0.25
CLK1P49759 AC005034.1-201ENST00000426657 489 ntBASIC13.48□□□□□ -0.25
CLK1P49759 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.48□□□□□ -0.25
CLK1P49759 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.48□□□□□ -0.25
CLK1P49759 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.48□□□□□ -0.25
CLK1P49759 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.48□□□□□ -0.25
CLK1P49759 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLK1P49759 KRT90P-201ENST00000549264 1064 ntBASIC13.48□□□□□ -0.25
CLK1P49759 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms