Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
TM4SF4P48230 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 MIR181D-201ENST00000384853 137 ntBASIC15.69■□□□□ 0.1
TM4SF4P48230 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 NAA10-205ENST00000393712 908 ntTSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC079325.1-201ENST00000430386 857 ntBASIC15.69■□□□□ 0.1
TM4SF4P48230 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 PDPN-208ENST00000509009 571 ntTSL 4 BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC15.69■□□□□ 0.1
TM4SF4P48230 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.69■□□□□ 0.1
TM4SF4P48230 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 AC079331.1-201ENST00000623200 1200 ntBASIC15.69■□□□□ 0.1
TM4SF4P48230 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
TM4SF4P48230 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TM4SF4P48230 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM4SF4P48230 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 AC022532.1-201ENST00000624563 1728 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 AC089987.1-201ENST00000551654 2209 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TM4SF4P48230 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TM4SF4P48230 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 MIR193A-201ENST00000384882 88 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 MIR766-201ENST00000390223 111 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 PPP1R2P10-201ENST00000393023 595 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC15.68■□□□□ 0.1
TM4SF4P48230 PLAC9P1-203ENST00000440031 223 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 HNRNPA1P73-201ENST00000446472 928 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 AC005077.3-201ENST00000449614 213 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 HNRNPA1P4-201ENST00000509706 756 ntBASIC15.68■□□□□ 0.1
TM4SF4P48230 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC15.68■□□□□ 0.1
TM4SF4P48230 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TM4SF4P48230 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
TM4SF4P48230 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
TM4SF4P48230 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM4SF4P48230 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms