Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RPL18P13-201ENST00000478088 569 ntBASIC14.88□□□□□ -0.03
SLC1A1P43005 AC021723.1-201ENST00000486306 515 ntBASIC14.88□□□□□ -0.03
SLC1A1P43005 HLA-J-204ENST00000495278 958 ntBASIC14.88□□□□□ -0.03
SLC1A1P43005 AC092299.1-201ENST00000632679 757 ntBASIC14.88□□□□□ -0.03
SLC1A1P43005 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 AC004241.5-201ENST00000623870 2448 ntBASIC14.88□□□□□ -0.03
SLC1A1P43005 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC1A1P43005 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC1A1P43005 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC1A1P43005 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SLC1A1P43005 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 AL355102.3-201ENST00000554299 1678 ntBASIC14.87□□□□□ -0.03
SLC1A1P43005 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 AL139158.3-201ENST00000641212 1562 ntBASIC14.87□□□□□ -0.03
SLC1A1P43005 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC1A1P43005 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC1A1P43005 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC1A1P43005 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC1A1P43005 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC1A1P43005 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 SNX29P1-201ENST00000548357 1007 ntBASIC14.87□□□□□ -0.03
SLC1A1P43005 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC1A1P43005 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC1A1P43005 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 MIR6775-201ENST00000617557 69 ntBASIC14.87□□□□□ -0.03
SLC1A1P43005 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC1A1P43005 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 LINC01165-201ENST00000445190 1623 ntBASIC14.87□□□□□ -0.03
SLC1A1P43005 MKRN5P-201ENST00000445263 1467 ntBASIC14.87□□□□□ -0.03
SLC1A1P43005 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC1A1P43005 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC1A1P43005 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC1A1P43005 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 PCDHA5-203ENST00000614258 4248 ntBASIC14.86□□□□□ -0.03
SLC1A1P43005 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 363.2 ms