Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.83□□□□□ -0.04
MTHFRP42898 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.83□□□□□ -0.04
MTHFRP42898 AC067931.2-201ENST00000623655 2003 ntBASIC14.83□□□□□ -0.04
MTHFRP42898 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 AC104581.4-201ENST00000623126 3052 ntBASIC14.83□□□□□ -0.04
MTHFRP42898 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.83□□□□□ -0.04
MTHFRP42898 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.83□□□□□ -0.04
MTHFRP42898 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
MTHFRP42898 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.82□□□□□ -0.04
MTHFRP42898 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.82□□□□□ -0.04
MTHFRP42898 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.82□□□□□ -0.04
MTHFRP42898 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC106047.2-201ENST00000511723 743 ntBASIC14.82□□□□□ -0.04
MTHFRP42898 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC005740.1-201ENST00000515639 522 ntBASIC14.82□□□□□ -0.04
MTHFRP42898 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
MTHFRP42898 KLF17P1-201ENST00000547105 1126 ntBASIC14.82□□□□□ -0.04
MTHFRP42898 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.82□□□□□ -0.04
MTHFRP42898 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MTHFRP42898 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MTHFRP42898 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 AC004554.1-201ENST00000422830 1468 ntBASIC14.82□□□□□ -0.04
MTHFRP42898 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MTHFRP42898 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.82□□□□□ -0.04
MTHFRP42898 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 ODCP-201ENST00000459650 1639 ntBASIC14.81□□□□□ -0.04
MTHFRP42898 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.81□□□□□ -0.04
MTHFRP42898 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MTHFRP42898 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.81□□□□□ -0.04
MTHFRP42898 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms