Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP6P35125 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP6P35125 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 SOD2-205ENST00000444946 917 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 RNU1-80P-201ENST00000459500 161 ntBASIC18.66■□□□□ 0.58
USP6P35125 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC18.66■□□□□ 0.58
USP6P35125 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.66■□□□□ 0.58
USP6P35125 METTL7AP1-201ENST00000547343 496 ntBASIC18.66■□□□□ 0.58
USP6P35125 AC004801.1-201ENST00000549557 360 ntBASIC18.66■□□□□ 0.58
USP6P35125 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 AC137723.2-201ENST00000623540 398 ntBASIC18.66■□□□□ 0.58
USP6P35125 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
USP6P35125 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP6P35125 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 AL928654.5-201ENST00000624831 2501 ntBASIC18.66■□□□□ 0.58
USP6P35125 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP6P35125 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USP6P35125 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP6P35125 CCL19-202ENST00000378800 414 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP6P35125 KRT18P33-201ENST00000398525 1043 ntBASIC18.66■□□□□ 0.58
USP6P35125 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.66■□□□□ 0.58
USP6P35125 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 CCND3P1-201ENST00000438347 580 ntBASIC18.66■□□□□ 0.58
USP6P35125 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 AC023906.1-201ENST00000486386 453 ntBASIC18.66■□□□□ 0.58
USP6P35125 AC091304.3-201ENST00000566500 716 ntBASIC18.66■□□□□ 0.58
USP6P35125 FBXO36P1-201ENST00000579006 471 ntBASIC18.66■□□□□ 0.58
USP6P35125 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC18.66■□□□□ 0.58
USP6P35125 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP6P35125 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP6P35125 AL157996.1-201ENST00000624684 2299 ntBASIC18.65■□□□□ 0.58
USP6P35125 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP6P35125 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6P35125 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP6P35125 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6P35125 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6P35125 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6P35125 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 RN7SL121P-201ENST00000584223 273 ntBASIC18.65■□□□□ 0.58
USP6P35125 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC18.65■□□□□ 0.58
USP6P35125 AL356740.1-201ENST00000602192 1297 ntBASIC18.65■□□□□ 0.58
USP6P35125 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.65■□□□□ 0.58
USP6P35125 AC048382.6-201ENST00000621980 1223 ntBASIC18.65■□□□□ 0.58
USP6P35125 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP6P35125 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
USP6P35125 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
USP6P35125 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.64■□□□□ 0.58
USP6P35125 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.64■□□□□ 0.58
USP6P35125 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP6P35125 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6P35125 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP6P35125 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 AC152010.1-201ENST00000415779 2006 ntBASIC18.64■□□□□ 0.57
USP6P35125 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 MST1P2-201ENST00000457982 2291 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms