Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TPM1P09493 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.75■□□□□ 0.11
TPM1P09493 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM1P09493 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.75■□□□□ 0.11
TPM1P09493 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM1P09493 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TPM1P09493 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM1P09493 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM1P09493 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM1P09493 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TPM1P09493 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 SPTLC1P1-201ENST00000447199 261 ntBASIC15.74■□□□□ 0.11
TPM1P09493 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.74■□□□□ 0.11
TPM1P09493 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.74■□□□□ 0.11
TPM1P09493 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.74■□□□□ 0.11
TPM1P09493 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.74■□□□□ 0.11
TPM1P09493 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM1P09493 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TPM1P09493 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM1P09493 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TPM1P09493 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TPM1P09493 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TPM1P09493 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.73■□□□□ 0.11
TPM1P09493 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TPM1P09493 AC134312.5-201ENST00000568031 1313 ntBASIC15.73■□□□□ 0.11
TPM1P09493 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TPM1P09493 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM1P09493 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.73■□□□□ 0.11
TPM1P09493 BAATP1-201ENST00000412284 1225 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms