Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TIMP1P01033 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TIMP1P01033 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC15.01□□□□□ -0.01
TIMP1P01033 AC006328.1-201ENST00000437571 379 ntBASIC15.01□□□□□ -0.01
TIMP1P01033 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 YY1P2-201ENST00000438766 948 ntBASIC15.01□□□□□ -0.01
TIMP1P01033 AC092865.2-201ENST00000439409 971 ntBASIC15.01□□□□□ -0.01
TIMP1P01033 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC15.01□□□□□ -0.01
TIMP1P01033 B9D1-206ENST00000461069 923 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 AC233724.9-201ENST00000511694 407 ntBASIC15.01□□□□□ -0.01
TIMP1P01033 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 AC090505.1-201ENST00000430515 1834 ntBASIC15.01□□□□□ -0.01
TIMP1P01033 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 AC022532.1-201ENST00000624563 1728 ntBASIC15□□□□□ -0.01
TIMP1P01033 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 DBET-201ENST00000630918 3363 ntBASIC15□□□□□ -0.01
TIMP1P01033 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC15□□□□□ -0.01
TIMP1P01033 TPT1P11-201ENST00000458482 498 ntBASIC15□□□□□ -0.01
TIMP1P01033 NDUFB2P1-201ENST00000506966 295 ntBASIC15□□□□□ -0.01
TIMP1P01033 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 CCND3P2-201ENST00000579393 537 ntBASIC15□□□□□ -0.01
TIMP1P01033 RN7SL478P-201ENST00000584358 298 ntBASIC15□□□□□ -0.01
TIMP1P01033 AL512324.3-201ENST00000619383 882 ntBASIC15□□□□□ -0.01
TIMP1P01033 AL139424.3-202ENST00000641619 917 ntBASIC15□□□□□ -0.01
TIMP1P01033 MTHFR-210ENST00000641407 2387 ntBASIC15□□□□□ -0.01
TIMP1P01033 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15□□□□□ -0.01
TIMP1P01033 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMP1P01033 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TIMP1P01033 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMP1P01033 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMP1P01033 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMP1P01033 TUBB2BP1-201ENST00000404155 871 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms