Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 LAP3P2-201ENST00000454686 1454 ntBASIC13.84□□□□□ -0.19
C4orf47A7E2U8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 AC019109.1-201ENST00000401725 1874 ntBASIC13.84□□□□□ -0.19
C4orf47A7E2U8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
C4orf47A7E2U8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
C4orf47A7E2U8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C4orf47A7E2U8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
C4orf47A7E2U8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.83□□□□□ -0.19
C4orf47A7E2U8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AL365181.1-201ENST00000564032 1828 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SNX15-201ENST00000352068 771 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AL080243.1-201ENST00000423293 1060 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AC027612.2-202ENST00000445955 1199 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AC100858.1-201ENST00000514059 1228 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 CES1P2-201ENST00000566467 1242 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 FBXO36P1-201ENST00000579006 471 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AL009176.1-201ENST00000607876 650 ntBASIC13.83□□□□□ -0.2
C4orf47A7E2U8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C4orf47A7E2U8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 AC117489.1-201ENST00000625169 3217 ntBASIC13.82□□□□□ -0.2
C4orf47A7E2U8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C4orf47A7E2U8 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms