Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 RN7SKP230-201ENST00000365642 335 ntBASIC15.53■□□□□ 0.08
CCDC66A2RUB6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 TSPY16P-201ENST00000449843 468 ntBASIC15.53■□□□□ 0.08
CCDC66A2RUB6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 AC024075.2-201ENST00000598112 1473 ntBASIC15.52■□□□□ 0.08
CCDC66A2RUB6 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 MYCLP2-201ENST00000449268 967 ntBASIC15.52■□□□□ 0.08
CCDC66A2RUB6 AC022137.2-201ENST00000503482 481 ntBASIC15.52■□□□□ 0.08
CCDC66A2RUB6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 CLUHP6-201ENST00000580789 941 ntBASIC15.52■□□□□ 0.08
CCDC66A2RUB6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 AC138696.2-201ENST00000607376 223 ntBASIC15.52■□□□□ 0.08
CCDC66A2RUB6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCDC66A2RUB6 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC66A2RUB6 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 AC011498.7-201ENST00000624986 2027 ntBASIC15.51■□□□□ 0.07
CCDC66A2RUB6 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC66A2RUB6 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms