Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GOLGA2P8-201ENST00000505201 779 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 EEF1GP8-201ENST00000506566 1154 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC100858.1-201ENST00000514059 1228 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AL132994.1-201ENST00000554098 400 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC132825.4-202ENST00000578792 434 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 RN7SL455P-201ENST00000580629 282 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 CICP14-201ENST00000629111 2732 ntBASIC13.41□□□□□ -0.26
CCDC187A0A096LP49 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 OR2W2P-201ENST00000406313 909 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 KRT18P4-201ENST00000422599 1288 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AC068831.5-201ENST00000557387 328 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 CES1P2-201ENST00000566467 1242 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AL160191.2-201ENST00000603975 601 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 AP003392.6-201ENST00000607709 325 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 OR2I1P-209ENST00000641730 5365 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCDC187A0A096LP49 CICP24-201ENST00000605464 2705 ntBASIC13.4□□□□□ -0.27
CCDC187A0A096LP49 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 MIR566-201ENST00000385187 94 ntBASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCDC187A0A096LP49 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms