Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 IMPDH1P8-201ENST00000413639 1525 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 FCRL2-201ENST00000361516 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 AC092902.5-201ENST00000641650 3256 ntBASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 AC023449.2-201ENST00000620538 2400 ntBASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LINC01558Q9Y6Z2 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 OSBPL6-206ENST00000409045 3427 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AC111182.1-201ENST00000588701 3419 ntBASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AC142381.2-201ENST00000566120 298 ntBASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AC083880.1-201ENST00000608266 535 ntBASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AC073592.4-201ENST00000623827 446 ntBASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AP000867.4-201ENST00000641616 219 ntBASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AC092123.2-201ENST00000611189 5421 ntBASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 MAP2K6-206ENST00000590474 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms