Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 SIGLEC20P-201ENST00000595243 1311 ntBASIC15.88■□□□□ 0.13
TRIM17Q9Y577 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM17Q9Y577 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM17Q9Y577 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM17Q9Y577 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM17Q9Y577 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 AC092115.1-201ENST00000566277 1402 ntBASIC15.87■□□□□ 0.13
TRIM17Q9Y577 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 U3.5-201ENST00000363448 216 ntBASIC15.87■□□□□ 0.13
TRIM17Q9Y577 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 RN7SL684P-201ENST00000465665 294 ntBASIC15.87■□□□□ 0.13
TRIM17Q9Y577 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 AC112250.1-201ENST00000504640 745 ntBASIC15.87■□□□□ 0.13
TRIM17Q9Y577 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 AP003040.1-201ENST00000532044 1024 ntBASIC15.87■□□□□ 0.13
TRIM17Q9Y577 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 SORD2P-201ENST00000558556 1069 ntBASIC15.87■□□□□ 0.13
TRIM17Q9Y577 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM17Q9Y577 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 SALL4P6-201ENST00000429385 1691 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 U73169.1-201ENST00000395152 367 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 KRT8P6-201ENST00000399259 1207 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 CFL1P6-201ENST00000400899 494 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 TUBB2BP1-201ENST00000404155 871 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 BX088651.3-201ENST00000418155 352 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 CCND3P1-201ENST00000438347 580 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 OR4C14P-201ENST00000440929 923 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 CDKN2A-AS1-201ENST00000441769 823 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 TMA16-204ENST00000508268 608 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 CCNL2P1-201ENST00000512846 969 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 AC104640.1-201ENST00000562617 2109 ntBASIC15.86■□□□□ 0.13
TRIM17Q9Y577 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM17Q9Y577 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms