Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC5Q9UQL6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HDAC5Q9UQL6 CICP16-201ENST00000502609 2813 ntBASIC17.71■□□□□ 0.42
HDAC5Q9UQL6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 GRK6P1-201ENST00000400595 1711 ntBASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 RPL8P2-201ENST00000430538 502 ntBASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 CEP164P1-201ENST00000455142 418 ntBASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 MIR3907-201ENST00000579424 151 ntBASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 AL353726.2-201ENST00000623259 884 ntBASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC5Q9UQL6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 AC103810.10-201ENST00000606504 343 ntBASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 AC051619.9-201ENST00000623237 597 ntBASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 DMBT1P1-203ENST00000636837 4628 ntBASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 AL591122.2-201ENST00000624125 1853 ntBASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC5Q9UQL6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC5Q9UQL6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC5Q9UQL6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC5Q9UQL6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC5Q9UQL6 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.68■□□□□ 0.42
HDAC5Q9UQL6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC5Q9UQL6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms