Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 FP325330.2-201ENST00000624219 5630 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 LINC01165-201ENST00000445190 1623 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC073352.2-201ENST00000609385 439 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 COX6A1P2-201ENST00000620597 330 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC009093.10-201ENST00000641956 1442 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 KRT8P28-201ENST00000433288 1390 ntBASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AHCYP4-201ENST00000419201 1315 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AP000356.3-201ENST00000382243 753 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AC253536.4-201ENST00000440539 267 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 MIR3188-201ENST00000583494 85 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 MEG3_2.1-201ENST00000611456 105 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AC051619.9-201ENST00000623237 597 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms