Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC125807.2-201ENST00000513358 3514 ntBASIC17.54■□□□□ 0.4
UPF2Q9HAU5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 TPM3P8-201ENST00000330554 643 ntBASIC17.53■□□□□ 0.4
UPF2Q9HAU5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 INE1-201ENST00000456273 945 ntBASIC17.53■□□□□ 0.4
UPF2Q9HAU5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 AC009118.2-201ENST00000613275 655 ntBASIC17.53■□□□□ 0.4
UPF2Q9HAU5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 POM121L14P-201ENST00000406100 1558 ntBASIC17.53■□□□□ 0.4
UPF2Q9HAU5 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF2Q9HAU5 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 AC010336.1-201ENST00000539278 4739 ntBASIC17.52■□□□□ 0.4
UPF2Q9HAU5 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.52■□□□□ 0.4
UPF2Q9HAU5 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 METTL21AP1-201ENST00000438852 635 ntBASIC17.52■□□□□ 0.4
UPF2Q9HAU5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 AC093214.1-201ENST00000511688 1107 ntBASIC17.52■□□□□ 0.4
UPF2Q9HAU5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 AP001160.2-201ENST00000596071 487 ntBASIC17.52■□□□□ 0.4
UPF2Q9HAU5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF2Q9HAU5 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms