Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC022966.2-201ENST00000587434 367 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC009118.3-201ENST00000622896 873 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC106872.9-201ENST00000512437 1393 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 TMEM256P1-201ENST00000430550 340 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 RN7SL111P-201ENST00000468841 285 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 MIR6819-201ENST00000622122 61 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AF013593.1-201ENST00000458074 1487 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 FAM45BP-202ENST00000592932 1624 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AGAP7P-201ENST00000582299 2062 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AGAP14-201ENST00000624701 2060 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC069421.1-201ENST00000447462 323 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 NAA38-204ENST00000575208 529 ntTSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC138430.2-201ENST00000624068 504 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 AC245140.2-201ENST00000624054 1939 ntBASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
ALMS1Q8TCU4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC9.15□□□□□ -0.95
ALMS1Q8TCU4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 TNRC18P2-201ENST00000417666 2714 ntBASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALMS1Q8TCU4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms