Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 ELL2P1-201ENST00000413990 1906 ntBASIC13.43□□□□□ -0.26
LPCAT4Q643R3 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.43□□□□□ -0.26
LPCAT4Q643R3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AC025183.3-201ENST00000623526 1482 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 SPDYE7P-202ENST00000420373 878 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ARSEP1-201ENST00000420443 635 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 VDAC1P7-201ENST00000462417 847 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 GIMAP3P-201ENST00000495150 836 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL049840.4-201ENST00000602422 811 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL603764.1-201ENST00000636452 321 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.42□□□□□ -0.26
LPCAT4Q643R3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LPCAT4Q643R3 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LPCAT4Q643R3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms