Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 AP000356.3-201ENST00000382243 753 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 AC103592.1-201ENST00000394513 664 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.28□□□□□ -0.28
EFNA3P52797 FXNP2-201ENST00000411625 547 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 AL627422.1-201ENST00000434104 580 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNA3P52797 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNA3P52797 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 RPS2P36-201ENST00000456516 831 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 RN7SL181P-201ENST00000462921 277 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.28□□□□□ -0.28
EFNA3P52797 ORAOV1P1-201ENST00000503108 395 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNA3P52797 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 AL133467.4-201ENST00000602953 725 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 AC092171.5-201ENST00000608012 942 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 AC025262.2-201ENST00000623975 1056 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 AL157996.1-201ENST00000624684 2299 ntBASIC13.28□□□□□ -0.28
EFNA3P52797 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNA3P52797 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
EFNA3P52797 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNA3P52797 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.27□□□□□ -0.28
EFNA3P52797 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.27□□□□□ -0.28
EFNA3P52797 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
EFNA3P52797 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
EFNA3P52797 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
EFNA3P52797 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
EFNA3P52797 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
EFNA3P52797 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.27□□□□□ -0.28
EFNA3P52797 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.27□□□□□ -0.28
EFNA3P52797 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNA3P52797 USP17L6P-201ENST00000382470 1197 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EFNA3P52797 AC078991.1-201ENST00000437297 610 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNA3P52797 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.27□□□□□ -0.29
EFNA3P52797 KRT18P15-201ENST00000458108 1291 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNA3P52797 RPL18AP8-201ENST00000486071 528 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
EFNA3P52797 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
EFNA3P52797 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.27□□□□□ -0.29
EFNA3P52797 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNA3P52797 KLF17P1-201ENST00000547105 1126 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNA3P52797 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNA3P52797 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNA3P52797 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNA3P52797 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNA3P52797 RN7SL555P-201ENST00000584742 339 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNA3P52797 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.27□□□□□ -0.29
EFNA3P52797 SPCS2P2-201ENST00000603270 608 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 AC087045.2-201ENST00000606279 1003 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 AC005041.3-201ENST00000606287 649 ntBASIC13.27□□□□□ -0.29
EFNA3P52797 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms