Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PCDHA5-203ENST00000614258 4248 ntBASIC12.58□□□□□ -0.4
CX3CR1P49238 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 REXO1L1P-201ENST00000379010 6598 ntBASIC12.57□□□□□ -0.4
CX3CR1P49238 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CX3CR1P49238 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 ST13P19-201ENST00000442505 1124 ntBASIC12.57□□□□□ -0.4
CX3CR1P49238 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.57□□□□□ -0.4
CX3CR1P49238 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.57□□□□□ -0.4
CX3CR1P49238 AL512343.1-201ENST00000605837 169 ntBASIC12.57□□□□□ -0.4
CX3CR1P49238 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CR1P49238 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CR1P49238 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CR1P49238 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CX3CR1P49238 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CX3CR1P49238 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.56□□□□□ -0.4
CX3CR1P49238 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AC104989.1-201ENST00000519711 778 ntBASIC12.56□□□□□ -0.4
CX3CR1P49238 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.56□□□□□ -0.4
CX3CR1P49238 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AC124068.2-201ENST00000569473 1109 ntBASIC12.56□□□□□ -0.4
CX3CR1P49238 MIR4741-201ENST00000579822 90 ntBASIC12.56□□□□□ -0.4
CX3CR1P49238 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.56□□□□□ -0.4
CX3CR1P49238 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 AC244157.2-201ENST00000616239 1006 ntBASIC12.56□□□□□ -0.4
CX3CR1P49238 AL162274.1-201ENST00000617191 1098 ntBASIC12.56□□□□□ -0.4
CX3CR1P49238 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CR1P49238 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CR1P49238 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms