Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TNNI2P48788 AP000354.1-201ENST00000396982 456 ntBASIC16.81■□□□□ 0.28
TNNI2P48788 OR52M2P-201ENST00000414298 959 ntBASIC16.81■□□□□ 0.28
TNNI2P48788 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.81■□□□□ 0.28
TNNI2P48788 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.81■□□□□ 0.28
TNNI2P48788 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.81■□□□□ 0.28
TNNI2P48788 RN7SL582P-201ENST00000491078 279 ntBASIC16.81■□□□□ 0.28
TNNI2P48788 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.81■□□□□ 0.28
TNNI2P48788 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.81■□□□□ 0.28
TNNI2P48788 AP005212.2-201ENST00000584979 510 ntBASIC16.81■□□□□ 0.28
TNNI2P48788 AC006483.2-201ENST00000609813 515 ntBASIC16.81■□□□□ 0.28
TNNI2P48788 AC091769.1-201ENST00000619576 568 ntBASIC16.81■□□□□ 0.28
TNNI2P48788 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.81■□□□□ 0.28
TNNI2P48788 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.81■□□□□ 0.28
TNNI2P48788 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.81■□□□□ 0.28
TNNI2P48788 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNNI2P48788 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
TNNI2P48788 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TNNI2P48788 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 AC103592.1-201ENST00000394513 664 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 AC092573.1-201ENST00000433054 884 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.8■□□□□ 0.28
TNNI2P48788 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.8■□□□□ 0.28
TNNI2P48788 PRSS3P1-201ENST00000503996 742 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.8■□□□□ 0.28
TNNI2P48788 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.8■□□□□ 0.28
TNNI2P48788 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.8■□□□□ 0.28
TNNI2P48788 AC013553.1-201ENST00000560906 267 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 TRMT112P3-201ENST00000580149 358 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 PEBP1P2-201ENST00000603980 558 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 AL009176.1-201ENST00000607876 650 ntBASIC16.8■□□□□ 0.28
TNNI2P48788 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
TNNI2P48788 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TNNI2P48788 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNNI2P48788 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TNNI2P48788 PDXDC2P-206ENST00000534700 1315 ntBASIC16.79■□□□□ 0.28
TNNI2P48788 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNNI2P48788 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TNNI2P48788 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.79■□□□□ 0.28
TNNI2P48788 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.79■□□□□ 0.28
TNNI2P48788 GOLGA2P8-201ENST00000505201 779 ntBASIC16.79■□□□□ 0.28
TNNI2P48788 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.79■□□□□ 0.28
TNNI2P48788 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TNNI2P48788 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.79■□□□□ 0.28
TNNI2P48788 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.79■□□□□ 0.28
TNNI2P48788 GOLGA2P7-209ENST00000560408 745 ntBASIC16.79■□□□□ 0.28
TNNI2P48788 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.79■□□□□ 0.28
TNNI2P48788 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.79■□□□□ 0.28
TNNI2P48788 RN7SL455P-201ENST00000580629 282 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms