Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MMP13P45452 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 TUBB8P8-201ENST00000458717 1058 ntBASIC14.84□□□□□ -0.03
MMP13P45452 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP13P45452 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP13P45452 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 AGAP12P-201ENST00000585227 2359 ntBASIC14.84□□□□□ -0.03
MMP13P45452 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 AC064801.2-201ENST00000625052 1303 ntBASIC14.84□□□□□ -0.03
MMP13P45452 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.84□□□□□ -0.03
MMP13P45452 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP13P45452 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP13P45452 AL118506.1-201ENST00000601296 3082 ntBASIC14.84□□□□□ -0.03
MMP13P45452 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP13P45452 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP13P45452 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MMP13P45452 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP13P45452 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
MMP13P45452 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
MMP13P45452 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.83□□□□□ -0.03
MMP13P45452 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MMP13P45452 AL139385.1-201ENST00000611744 3272 ntBASIC14.83□□□□□ -0.03
MMP13P45452 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
MMP13P45452 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MMP13P45452 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.83□□□□□ -0.04
MMP13P45452 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
MMP13P45452 AL161932.2-201ENST00000435436 679 ntBASIC14.83□□□□□ -0.04
MMP13P45452 POM121L10P-201ENST00000436994 1285 ntBASIC14.83□□□□□ -0.04
MMP13P45452 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.83□□□□□ -0.04
MMP13P45452 RNMTL1P1-201ENST00000454103 560 ntBASIC14.83□□□□□ -0.04
MMP13P45452 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.83□□□□□ -0.04
MMP13P45452 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.83□□□□□ -0.04
MMP13P45452 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.83□□□□□ -0.04
MMP13P45452 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.83□□□□□ -0.04
MMP13P45452 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
MMP13P45452 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 AL023803.2-201ENST00000620080 638 ntBASIC14.83□□□□□ -0.04
MMP13P45452 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.83□□□□□ -0.04
MMP13P45452 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MMP13P45452 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MMP13P45452 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MMP13P45452 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MMP13P45452 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.83□□□□□ -0.04
MMP13P45452 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 REXO1L6P-201ENST00000603433 1515 ntBASIC14.82□□□□□ -0.04
MMP13P45452 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MMP13P45452 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MMP13P45452 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 MIR1908-201ENST00000410394 80 ntBASIC14.82□□□□□ -0.04
MMP13P45452 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.82□□□□□ -0.04
MMP13P45452 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 FAM8A2P-201ENST00000528813 1142 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms