Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
APOBEC1P41238 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.87□□□□□ -0.35
APOBEC1P41238 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.87□□□□□ -0.35
APOBEC1P41238 DUX4L50-201ENST00000455245 715 ntBASIC12.87□□□□□ -0.35
APOBEC1P41238 KRT8P1-201ENST00000557533 1207 ntBASIC12.87□□□□□ -0.35
APOBEC1P41238 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.87□□□□□ -0.35
APOBEC1P41238 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.87□□□□□ -0.35
APOBEC1P41238 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.87□□□□□ -0.35
APOBEC1P41238 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
APOBEC1P41238 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 BRD7P5-201ENST00000299197 1822 ntBASIC12.87□□□□□ -0.35
APOBEC1P41238 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.87□□□□□ -0.35
APOBEC1P41238 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
APOBEC1P41238 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APOBEC1P41238 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.87□□□□□ -0.35
APOBEC1P41238 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.87□□□□□ -0.35
APOBEC1P41238 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOBEC1P41238 FRMPD2B-201ENST00000431305 1347 ntBASIC12.87□□□□□ -0.35
APOBEC1P41238 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APOBEC1P41238 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 AGAP10P-201ENST00000454844 2418 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 AC006987.1-201ENST00000413610 527 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 RPS9P1-201ENST00000419943 583 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 FNTAP2-201ENST00000430308 634 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.86□□□□□ -0.35
APOBEC1P41238 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APOBEC1P41238 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.86□□□□□ -0.35
APOBEC1P41238 ZNF767P-206ENST00000513792 565 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 POU5F1P2-201ENST00000521750 823 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 NDUFV2P1-201ENST00000596415 907 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
APOBEC1P41238 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 AC005252.3-201ENST00000623855 2258 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
APOBEC1P41238 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APOBEC1P41238 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.86□□□□□ -0.35
APOBEC1P41238 AC023794.5-201ENST00000564380 2157 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 AL139158.3-201ENST00000641212 1562 ntBASIC12.86□□□□□ -0.35
APOBEC1P41238 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.85□□□□□ -0.35
APOBEC1P41238 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
APOBEC1P41238 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBEC1P41238 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBEC1P41238 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
APOBEC1P41238 AC111170.3-201ENST00000624282 2464 ntBASIC12.85□□□□□ -0.35
APOBEC1P41238 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBEC1P41238 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
APOBEC1P41238 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBEC1P41238 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms