Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 AC092896.1-201ENST00000465850 380 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.71■□□□□ 0.43
COL15A1P39059 IGHEP2-201ENST00000519308 1256 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 BAK1P2-201ENST00000532665 631 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COL15A1P39059 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
COL15A1P39059 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL15A1P39059 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL15A1P39059 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL15A1P39059 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
COL15A1P39059 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
COL15A1P39059 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
COL15A1P39059 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.7■□□□□ 0.42
COL15A1P39059 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COL15A1P39059 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
COL15A1P39059 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.7■□□□□ 0.42
COL15A1P39059 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.7■□□□□ 0.42
COL15A1P39059 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COL15A1P39059 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.7■□□□□ 0.42
COL15A1P39059 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.7■□□□□ 0.42
COL15A1P39059 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.7■□□□□ 0.42
COL15A1P39059 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.7■□□□□ 0.42
COL15A1P39059 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.7■□□□□ 0.42
COL15A1P39059 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.7■□□□□ 0.42
COL15A1P39059 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.7■□□□□ 0.42
COL15A1P39059 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.7■□□□□ 0.42
COL15A1P39059 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
COL15A1P39059 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 PES1P2-201ENST00000449745 1735 ntBASIC17.7■□□□□ 0.42
COL15A1P39059 AC090643.2-201ENST00000623442 2029 ntBASIC17.7■□□□□ 0.42
COL15A1P39059 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL15A1P39059 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.69■□□□□ 0.42
COL15A1P39059 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.69■□□□□ 0.42
COL15A1P39059 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.69■□□□□ 0.42
COL15A1P39059 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.69■□□□□ 0.42
COL15A1P39059 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.69■□□□□ 0.42
COL15A1P39059 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 DKKL1P1-201ENST00000400550 698 ntBASIC17.69■□□□□ 0.42
COL15A1P39059 AC104961.1-201ENST00000427605 771 ntBASIC17.69■□□□□ 0.42
COL15A1P39059 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.69■□□□□ 0.42
COL15A1P39059 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.69■□□□□ 0.42
COL15A1P39059 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.69■□□□□ 0.42
COL15A1P39059 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL15A1P39059 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.69■□□□□ 0.42
COL15A1P39059 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.69■□□□□ 0.42
COL15A1P39059 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL15A1P39059 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms