Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.73□□□□□ -0.05
CD48P09326 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.73□□□□□ -0.05
CD48P09326 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.73□□□□□ -0.05
CD48P09326 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.73□□□□□ -0.05
CD48P09326 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.73□□□□□ -0.05
CD48P09326 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 AC108725.1-201ENST00000495472 409 ntBASIC14.73□□□□□ -0.05
CD48P09326 AC106794.1-201ENST00000506935 792 ntBASIC14.73□□□□□ -0.05
CD48P09326 AC005740.2-201ENST00000511085 419 ntBASIC14.73□□□□□ -0.05
CD48P09326 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 AC061965.1-201ENST00000560524 1465 ntBASIC14.73□□□□□ -0.05
CD48P09326 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CD48P09326 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.73□□□□□ -0.05
CD48P09326 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD48P09326 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 AL590824.1-201ENST00000403828 1349 ntBASIC14.72□□□□□ -0.05
CD48P09326 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CD48P09326 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.72□□□□□ -0.05
CD48P09326 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.72□□□□□ -0.05
CD48P09326 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.72□□□□□ -0.05
CD48P09326 RCC2P8-201ENST00000502779 1035 ntBASIC14.72□□□□□ -0.05
CD48P09326 MARK2P5-201ENST00000507649 634 ntBASIC14.72□□□□□ -0.05
CD48P09326 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.72□□□□□ -0.05
CD48P09326 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.72□□□□□ -0.05
CD48P09326 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 AL451050.2-201ENST00000606967 682 ntBASIC14.72□□□□□ -0.05
CD48P09326 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.72□□□□□ -0.05
CD48P09326 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.72□□□□□ -0.05
CD48P09326 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD48P09326 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 LINC01165-201ENST00000445190 1623 ntBASIC14.71□□□□□ -0.05
CD48P09326 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CD48P09326 BRWD1P1-201ENST00000401091 371 ntBASIC14.71□□□□□ -0.05
CD48P09326 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms