Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 AC009093.10-201ENST00000641956 1442 ntBASIC16.03■□□□□ 0.16
TPM3P06753 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 SLC7A15P-201ENST00000424028 1363 ntBASIC16.03■□□□□ 0.16
TPM3P06753 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 CLUHP2-201ENST00000426660 1303 ntBASIC16.03■□□□□ 0.16
TPM3P06753 FKBP4P6-201ENST00000457486 1332 ntBASIC16.03■□□□□ 0.16
TPM3P06753 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 AC003958.1-201ENST00000435883 421 ntBASIC16.03■□□□□ 0.16
TPM3P06753 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 FTLP10-202ENST00000505798 471 ntBASIC16.03■□□□□ 0.16
TPM3P06753 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TPM3P06753 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.03■□□□□ 0.16
TPM3P06753 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.03■□□□□ 0.16
TPM3P06753 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.03■□□□□ 0.16
TPM3P06753 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.03■□□□□ 0.16
TPM3P06753 AC104506.1-201ENST00000609247 429 ntBASIC16.03■□□□□ 0.16
TPM3P06753 AC004790.1-201ENST00000612686 536 ntBASIC16.03■□□□□ 0.16
TPM3P06753 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 AC020910.5-201ENST00000623668 1865 ntBASIC16.03■□□□□ 0.16
TPM3P06753 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC16.03■□□□□ 0.16
TPM3P06753 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TPM3P06753 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.02■□□□□ 0.16
TPM3P06753 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TPM3P06753 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.02■□□□□ 0.16
TPM3P06753 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.02■□□□□ 0.16
TPM3P06753 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 AC009955.4-201ENST00000597192 544 ntBASIC16.02■□□□□ 0.16
TPM3P06753 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.02■□□□□ 0.16
TPM3P06753 MIR8072-201ENST00000614241 80 ntBASIC16.02■□□□□ 0.16
TPM3P06753 AC138466.3-201ENST00000619983 221 ntBASIC16.02■□□□□ 0.16
TPM3P06753 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPM3P06753 PI4KAP2-201ENST00000360806 2080 ntBASIC16.02■□□□□ 0.15
TPM3P06753 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TPM3P06753 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TPM3P06753 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPM3P06753 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TPM3P06753 USO1-201ENST00000264904 4135 ntTSL 2 BASIC16.02■□□□□ 0.15
TPM3P06753 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC16.02■□□□□ 0.15
TPM3P06753 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TPM3P06753 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms