Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 GPAA1P2-201ENST00000417923 928 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 AKR7A2P1-201ENST00000460134 915 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-2O95096 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 AC005740.1-201ENST00000515639 522 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.09□□□□□ -0.31
NKX2-2O95096 AC090857.1-201ENST00000527400 390 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-2O95096 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.09□□□□□ -0.31
NKX2-2O95096 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-2O95096 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 MEG3_2.1-201ENST00000611456 105 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 AC015909.3-201ENST00000572855 1794 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-2O95096 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-2O95096 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
NKX2-2O95096 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-2O95096 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-2O95096 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-2O95096 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-2O95096 AC067931.2-201ENST00000623655 2003 ntBASIC13.08□□□□□ -0.31
NKX2-2O95096 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
NKX2-2O95096 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 AC008620.2-201ENST00000510294 1569 ntBASIC13.08□□□□□ -0.32
NKX2-2O95096 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-2O95096 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-2O95096 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 AL391647.1-201ENST00000395664 511 ntBASIC13.08□□□□□ -0.32
NKX2-2O95096 CYP46A4P-201ENST00000414953 267 ntBASIC13.08□□□□□ -0.32
NKX2-2O95096 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-2O95096 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX2-2O95096 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.08□□□□□ -0.32
NKX2-2O95096 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-2O95096 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX2-2O95096 RN7SL774P-201ENST00000577467 290 ntBASIC13.08□□□□□ -0.32
NKX2-2O95096 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-2O95096 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-2O95096 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-2O95096 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 AC025183.3-201ENST00000623526 1482 ntBASIC13.08□□□□□ -0.32
NKX2-2O95096 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-2O95096 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-2O95096 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-2O95096 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-2O95096 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms