Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 XBP1P1-201ENST00000436573 652 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 AK2P2-201ENST00000439142 405 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 KRT223P-202ENST00000449164 1292 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC021723.1-201ENST00000486306 515 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 MIR497HG-202ENST00000572453 3838 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 KRT18P8-201ENST00000581937 1246 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC092299.1-201ENST00000632679 757 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AHCYP4-201ENST00000419201 1315 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 LINC00115-201ENST00000473798 1317 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 FAM90A7P-201ENST00000382628 1395 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 FAM90A23P-201ENST00000400136 1395 ntBASIC11.48□□□□□ -0.57
SRRM4A7MD48 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CICP8-201ENST00000455800 2813 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 DGCR9-201ENST00000609630 2415 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 AC135782.3-201ENST00000562782 2105 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 KRT8P29-201ENST00000420409 1371 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 FAM21FP-201ENST00000426241 1131 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 MTX1P1-201ENST00000440904 838 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 HLA-J-204ENST00000495278 958 ntBASIC11.47□□□□□ -0.57
SRRM4A7MD48 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SRRM4A7MD48 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC11.47□□□□□ -0.57
SRRM4A7MD48 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms