Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PCDHA6-201ENST00000378126 3267 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 TPM3P8-201ENST00000330554 643 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC093214.1-201ENST00000511688 1107 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 JPT2-214ENST00000569765 782 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC027601.3-201ENST00000622907 509 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 TUBB4AP1-201ENST00000450755 1325 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 KRT18P28-201ENST00000453838 1332 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 AC061965.1-201ENST00000560524 1465 ntBASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBE2D4Q9Y2X8 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 MSTO2P-201ENST00000314835 1709 ntBASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2D4Q9Y2X8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 AC012441.1-201ENST00000446669 685 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SPTLC1P1-201ENST00000447199 261 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 ELK1P1-201ENST00000485699 580 ntBASIC9.96□□□□□ -0.82
UBE2D4Q9Y2X8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms